Find the optimal labelling sites on your protein
Upload a PDB structure, select a fluorophore, and get scored residues with 3D visualisation.
How it works
1
Upload
Upload your PDB structure file
2
Configure
Select chains, fluorophore, and analysis mode
3
Analyse
Get per-residue scores with interactive 3D view
Scoring Parameters
Solvent Exposure — accessibility to labelling reagents
Secondary Structure — stability of the labelling site
Conservation — evolutionary importance of the residue
Cysteine Resemblance — compatibility with cysteine-reactive dyes